Protein–RNA interactions for Protein: Q9JIM3

Ercc6l2, DNA excision repair protein ERCC-6-like 2, mousemouse

Predictions only

Length 1,537 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc6l2Q9JIM3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ercc6l2Q9JIM3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ercc6l2Q9JIM3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Gm5912-201ENSMUST00000122282 1438 ntBASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ercc6l2Q9JIM3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 AC122459.1-201ENSMUST00000228373 885 ntBASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Nsd1-205ENSMUST00000224693 852 ntBASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ercc6l2Q9JIM3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ercc6l2Q9JIM3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC21.33■■□□□ 1.01
Ercc6l2Q9JIM3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ercc6l2Q9JIM3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ercc6l2Q9JIM3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ercc6l2Q9JIM3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ercc6l2Q9JIM3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ercc6l2Q9JIM3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Ercc6l2Q9JIM3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC21.33■■□□□ 1
Ercc6l2Q9JIM3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC21.33■■□□□ 1
Ercc6l2Q9JIM3 AC164567.1-201ENSMUST00000219185 960 ntBASIC21.33■■□□□ 1
Ercc6l2Q9JIM3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ercc6l2Q9JIM3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ercc6l2Q9JIM3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ercc6l2Q9JIM3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC21.33■■□□□ 1
Ercc6l2Q9JIM3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Gm5187-201ENSMUST00000117317 991 ntBASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Gm26083-201ENSMUST00000157904 193 ntBASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Gm22902-201ENSMUST00000158488 302 ntBASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Mir7654-201ENSMUST00000185082 70 ntBASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 AC110817.1-201ENSMUST00000225706 605 ntBASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc6l2Q9JIM3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 Gm7558-201ENSMUST00000193221 1165 ntBASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 Gm7783-201ENSMUST00000204795 781 ntBASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ercc6l2Q9JIM3 Gm9816-201ENSMUST00000122292 1414 ntBASIC21.3■■□□□ 1
Ercc6l2Q9JIM3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ercc6l2Q9JIM3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ercc6l2Q9JIM3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ercc6l2Q9JIM3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Ercc6l2Q9JIM3 Gm27341-201ENSMUST00000183570 106 ntBASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms