Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup50Q9JIH2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup50Q9JIH2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup50Q9JIH2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.1■□□□□ 0.17
Nup50Q9JIH2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.1■□□□□ 0.17
Nup50Q9JIH2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup50Q9JIH2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nup50Q9JIH2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup50Q9JIH2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nup50Q9JIH2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup50Q9JIH2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Nup50Q9JIH2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nup50Q9JIH2 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.08■□□□□ 0.17
Nup50Q9JIH2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nup50Q9JIH2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nup50Q9JIH2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Nup50Q9JIH2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nup50Q9JIH2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nup50Q9JIH2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nup50Q9JIH2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Gm4535-201ENSMUST00000182274 558 ntBASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Gm10355-201ENSMUST00000097146 517 ntBASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup50Q9JIH2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Ank2-226ENSMUST00000189368 339 ntBASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Gm44357-201ENSMUST00000195897 142 ntBASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Gm19658-201ENSMUST00000196231 138 ntBASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Gm44367-201ENSMUST00000196836 138 ntBASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Gm44350-201ENSMUST00000197197 138 ntBASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Gm44390-201ENSMUST00000197533 144 ntBASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Gm44313-201ENSMUST00000198018 138 ntBASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Gm44486-201ENSMUST00000198508 138 ntBASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Gm44314-201ENSMUST00000199263 138 ntBASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Gm44394-201ENSMUST00000199558 138 ntBASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Gm44484-201ENSMUST00000199873 138 ntBASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Gm44466-201ENSMUST00000200264 138 ntBASIC16.07■□□□□ 0.16
Nup50Q9JIH2 Gm44359-201ENSMUST00000200671 138 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms