Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4bQ9ES00 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ube4bQ9ES00 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Gm37055-201ENSMUST00000191866 133 ntBASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Gm30025-201ENSMUST00000218555 728 ntBASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms