Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ripk4Q9ERK0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ripk4Q9ERK0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Asic1-205ENSMUST00000228185 1818 ntBASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Gm14701-201ENSMUST00000117156 348 ntBASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Gm15920-201ENSMUST00000118998 402 ntBASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ripk4Q9ERK0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Gm10576-201ENSMUST00000191927 825 ntBASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Grk6-207ENSMUST00000225925 2769 ntBASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ripk4Q9ERK0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ripk4Q9ERK0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms