Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dap3Q9ER88 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dap3Q9ER88 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dap3Q9ER88 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dap3Q9ER88 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dap3Q9ER88 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.05□□□□□ -0.16
Dap3Q9ER88 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dap3Q9ER88 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dap3Q9ER88 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dap3Q9ER88 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Dap3Q9ER88 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dap3Q9ER88 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Dap3Q9ER88 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Dap3Q9ER88 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Dap3Q9ER88 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.04□□□□□ -0.16
Dap3Q9ER88 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.04□□□□□ -0.16
Dap3Q9ER88 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.04□□□□□ -0.16
Dap3Q9ER88 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.04□□□□□ -0.16
Dap3Q9ER88 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dap3Q9ER88 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Gm9013-201ENSMUST00000132939 882 ntBASIC14.03□□□□□ -0.16
Dap3Q9ER88 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.03□□□□□ -0.16
Dap3Q9ER88 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Dap3Q9ER88 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.03□□□□□ -0.16
Dap3Q9ER88 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Dap3Q9ER88 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.03□□□□□ -0.16
Dap3Q9ER88 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dap3Q9ER88 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Dap3Q9ER88 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Dap3Q9ER88 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Dap3Q9ER88 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Dap3Q9ER88 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.02□□□□□ -0.16
Dap3Q9ER88 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Dap3Q9ER88 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Dap3Q9ER88 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Dap3Q9ER88 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Dap3Q9ER88 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Dap3Q9ER88 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Dap3Q9ER88 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Dap3Q9ER88 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Dap3Q9ER88 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dap3Q9ER88 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Dap3Q9ER88 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.02□□□□□ -0.17
Dap3Q9ER88 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.02□□□□□ -0.17
Dap3Q9ER88 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.02□□□□□ -0.17
Dap3Q9ER88 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Dap3Q9ER88 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Dap3Q9ER88 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dap3Q9ER88 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dap3Q9ER88 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dap3Q9ER88 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dap3Q9ER88 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms