Protein–RNA interactions for Protein: Q9EPE9

Atp13a1, Manganese-transporting ATPase 13A1, mousemouse

Known RBP Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a1Q9EPE9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atp13a1Q9EPE9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.43■□□□□ 0.22
Atp13a1Q9EPE9 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.43■□□□□ 0.22
Atp13a1Q9EPE9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atp13a1Q9EPE9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atp13a1Q9EPE9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atp13a1Q9EPE9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Atp13a1Q9EPE9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atp13a1Q9EPE9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Gm9385-201ENSMUST00000117563 472 ntBASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atp13a1Q9EPE9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp13a1Q9EPE9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Rpph1-201ENSMUST00000175096 319 ntBASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Atp13a1Q9EPE9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Atp13a1Q9EPE9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Atp13a1Q9EPE9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp13a1Q9EPE9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms