Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Gm18737-201ENSMUST00000173594 937 ntBASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Mir6977-201ENSMUST00000184960 64 ntBASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rrp8Q9DB85 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rrp8Q9DB85 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rrp8Q9DB85 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp8Q9DB85 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp8Q9DB85 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rrp8Q9DB85 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp8Q9DB85 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp8Q9DB85 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp8Q9DB85 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp8Q9DB85 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp8Q9DB85 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp8Q9DB85 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp8Q9DB85 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.87□□□□□ -0.03
Rrp8Q9DB85 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Rrp8Q9DB85 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.87□□□□□ -0.03
Rrp8Q9DB85 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms