Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim42Q9D2H5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim42Q9D2H5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim42Q9D2H5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim42Q9D2H5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim42Q9D2H5 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim42Q9D2H5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.28■□□□□ 0.04
Trim42Q9D2H5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim42Q9D2H5 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.28■□□□□ 0.04
Trim42Q9D2H5 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim42Q9D2H5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim42Q9D2H5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim42Q9D2H5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Trim42Q9D2H5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim42Q9D2H5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim42Q9D2H5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim42Q9D2H5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim42Q9D2H5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim42Q9D2H5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim42Q9D2H5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim42Q9D2H5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim42Q9D2H5 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim42Q9D2H5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim42Q9D2H5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim42Q9D2H5 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.27■□□□□ 0.04
Trim42Q9D2H5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim42Q9D2H5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim42Q9D2H5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim42Q9D2H5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim42Q9D2H5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim42Q9D2H5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim42Q9D2H5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim42Q9D2H5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim42Q9D2H5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim42Q9D2H5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trim42Q9D2H5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim42Q9D2H5 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Trim42Q9D2H5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim42Q9D2H5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim42Q9D2H5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms