Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.62■□□□□ 0.09
Vps28Q9D1C8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.62■□□□□ 0.09
Vps28Q9D1C8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.62■□□□□ 0.09
Vps28Q9D1C8 Gm9727-201ENSMUST00000161387 555 ntBASIC15.62■□□□□ 0.09
Vps28Q9D1C8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.62■□□□□ 0.09
Vps28Q9D1C8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps28Q9D1C8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps28Q9D1C8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps28Q9D1C8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps28Q9D1C8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps28Q9D1C8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps28Q9D1C8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps28Q9D1C8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps28Q9D1C8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps28Q9D1C8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Gm11779-201ENSMUST00000118541 368 ntBASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Gm15467-201ENSMUST00000120582 445 ntBASIC15.61■□□□□ 0.09
Vps28Q9D1C8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.61■□□□□ 0.09
Vps28Q9D1C8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Gm8318-201ENSMUST00000182954 872 ntBASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps28Q9D1C8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Gm27300-201ENSMUST00000184085 97 ntBASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Gm27335-201ENSMUST00000184758 97 ntBASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps28Q9D1C8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Gm5264-201ENSMUST00000190584 848 ntBASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps28Q9D1C8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms