Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr1Q9CY50 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Rprl3-201ENSMUST00000157400 290 ntBASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Gm25406-201ENSMUST00000157599 105 ntBASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Gm27742-201ENSMUST00000184667 60 ntBASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr1Q9CY50 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr1Q9CY50 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Mir3081-201ENSMUST00000175305 84 ntBASIC16.54■□□□□ 0.24
Ssr1Q9CY50 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssr1Q9CY50 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms