Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Gm23984-201ENSMUST00000157139 203 ntBASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Gm24694-201ENSMUST00000180054 110 ntBASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Gm27663-201ENSMUST00000184839 110 ntBASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cldnd1Q9CQX5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cldnd1Q9CQX5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cldnd1Q9CQX5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cldnd1Q9CQX5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Cldnd1Q9CQX5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cldnd1Q9CQX5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cldnd1Q9CQX5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cldnd1Q9CQX5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Cldnd1Q9CQX5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Gm24543-201ENSMUST00000103867 82 ntBASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Gm13216-201ENSMUST00000117145 591 ntBASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Gm6912-201ENSMUST00000117218 544 ntBASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Gm11478-201ENSMUST00000117851 599 ntBASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Gm8515-201ENSMUST00000194852 576 ntBASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Gm45384-201ENSMUST00000210451 277 ntBASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms