Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim11Q99PQ2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Gm11780-201ENSMUST00000136880 516 ntBASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Trim11Q99PQ2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Gm6296-201ENSMUST00000222599 943 ntBASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim11Q99PQ2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim11Q99PQ2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim11Q99PQ2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim11Q99PQ2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim11Q99PQ2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim11Q99PQ2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Trim11Q99PQ2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim11Q99PQ2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim11Q99PQ2 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.35■□□□□ 0.37
Trim11Q99PQ2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim11Q99PQ2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.35■□□□□ 0.37
Trim11Q99PQ2 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.35■□□□□ 0.37
Trim11Q99PQ2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim11Q99PQ2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim11Q99PQ2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim11Q99PQ2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim11Q99PQ2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim11Q99PQ2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim11Q99PQ2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim11Q99PQ2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms