Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.92□□□□□ -0.02
Trim16Q99PP9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Gm4459-201ENSMUST00000118750 468 ntBASIC14.92□□□□□ -0.02
Trim16Q99PP9 Gm12497-201ENSMUST00000138778 237 ntBASIC14.92□□□□□ -0.02
Trim16Q99PP9 Gm6257-201ENSMUST00000163864 910 ntBASIC14.92□□□□□ -0.02
Trim16Q99PP9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim16Q99PP9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.91□□□□□ -0.02
Trim16Q99PP9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.91□□□□□ -0.02
Trim16Q99PP9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.91□□□□□ -0.02
Trim16Q99PP9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim16Q99PP9 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.9□□□□□ -0.02
Trim16Q99PP9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim16Q99PP9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.9□□□□□ -0.02
Trim16Q99PP9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.9□□□□□ -0.02
Trim16Q99PP9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.9□□□□□ -0.02
Trim16Q99PP9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.9□□□□□ -0.02
Trim16Q99PP9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim16Q99PP9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms