Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim8Q99PJ2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim8Q99PJ2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim8Q99PJ2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trim8Q99PJ2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim8Q99PJ2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim8Q99PJ2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Trim8Q99PJ2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim8Q99PJ2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim8Q99PJ2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.96□□□□□ -0.02
Trim8Q99PJ2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Gm25016-201ENSMUST00000158399 131 ntBASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Gm17808-201ENSMUST00000200859 894 ntBASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim8Q99PJ2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Gm33142-201ENSMUST00000193913 867 ntBASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim8Q99PJ2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim8Q99PJ2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms