Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Gm24694-201ENSMUST00000180054 110 ntBASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Gm27663-201ENSMUST00000184839 110 ntBASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Gm27892-201ENSMUST00000185017 106 ntBASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col25a1Q99MQ5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Gm15198-201ENSMUST00000117283 177 ntBASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Gm15358-201ENSMUST00000119249 520 ntBASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Gm7775-201ENSMUST00000218871 853 ntBASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Col25a1Q99MQ5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Col25a1Q99MQ5 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms