Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Efs-202ENSMUST00000227037 2540 ntBASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap3Q99LM2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap3Q99LM2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Gm15372-201ENSMUST00000120729 834 ntBASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap3Q99LM2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap3Q99LM2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms