Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.01■□□□□ 0.15
Clp1Q99LI9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.01■□□□□ 0.15
Clp1Q99LI9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Gm27533-201ENSMUST00000183800 152 ntBASIC16.01■□□□□ 0.15
Clp1Q99LI9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.01■□□□□ 0.15
Clp1Q99LI9 Gm7775-201ENSMUST00000218871 853 ntBASIC16.01■□□□□ 0.15
Clp1Q99LI9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Clp1Q99LI9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clp1Q99LI9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16■□□□□ 0.15
Clp1Q99LI9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16■□□□□ 0.15
Clp1Q99LI9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16■□□□□ 0.15
Clp1Q99LI9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16■□□□□ 0.15
Clp1Q99LI9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16■□□□□ 0.15
Clp1Q99LI9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16■□□□□ 0.15
Clp1Q99LI9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16■□□□□ 0.15
Clp1Q99LI9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Clp1Q99LI9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.99■□□□□ 0.15
Clp1Q99LI9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Clp1Q99LI9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Syt7-204ENSMUST00000223586 1344 ntBASIC15.99■□□□□ 0.15
Clp1Q99LI9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.99■□□□□ 0.15
Clp1Q99LI9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Clp1Q99LI9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.99■□□□□ 0.15
Clp1Q99LI9 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Gm16215-201ENSMUST00000161990 637 ntBASIC15.99■□□□□ 0.15
Clp1Q99LI9 Gm27838-201ENSMUST00000184829 128 ntBASIC15.99■□□□□ 0.15
Clp1Q99LI9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.99■□□□□ 0.15
Clp1Q99LI9 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.99■□□□□ 0.15
Clp1Q99LI9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clp1Q99LI9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clp1Q99LI9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clp1Q99LI9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clp1Q99LI9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Clp1Q99LI9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Clp1Q99LI9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Clp1Q99LI9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clp1Q99LI9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clp1Q99LI9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.98■□□□□ 0.15
Clp1Q99LI9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Clp1Q99LI9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Clp1Q99LI9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.98■□□□□ 0.15
Clp1Q99LI9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clp1Q99LI9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.98■□□□□ 0.15
Clp1Q99LI9 Gm44344-201ENSMUST00000200287 129 ntBASIC15.98■□□□□ 0.15
Clp1Q99LI9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms