Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.93■□□□□ 0.46
Col20a1Q923P0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col20a1Q923P0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Col20a1Q923P0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.91■□□□□ 0.46
Col20a1Q923P0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Gm6973-201ENSMUST00000117080 721 ntBASIC17.91■□□□□ 0.46
Col20a1Q923P0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.91■□□□□ 0.46
Col20a1Q923P0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.91■□□□□ 0.46
Col20a1Q923P0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col20a1Q923P0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col20a1Q923P0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col20a1Q923P0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.9■□□□□ 0.46
Col20a1Q923P0 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.9■□□□□ 0.46
Col20a1Q923P0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Gm43767-201ENSMUST00000198933 381 ntBASIC17.9■□□□□ 0.46
Col20a1Q923P0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.9■□□□□ 0.46
Col20a1Q923P0 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.9■□□□□ 0.46
Col20a1Q923P0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col20a1Q923P0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Col20a1Q923P0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Col20a1Q923P0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Col20a1Q923P0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col20a1Q923P0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col20a1Q923P0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
Col20a1Q923P0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col20a1Q923P0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.89■□□□□ 0.45
Col20a1Q923P0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col20a1Q923P0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col20a1Q923P0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Col20a1Q923P0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms