Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Gm7367-201ENSMUST00000057611 492 ntBASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Gm27011-201ENSMUST00000182352 972 ntBASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1aQ921W0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 Gm45058-201ENSMUST00000205810 766 ntBASIC13.46□□□□□ -0.25
Chmp1aQ921W0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1aQ921W0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Chmp1aQ921W0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp1aQ921W0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp1aQ921W0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.46□□□□□ -0.26
Chmp1aQ921W0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp1aQ921W0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp1aQ921W0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp1aQ921W0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Gm13559-201ENSMUST00000120476 863 ntBASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Gm22240-201ENSMUST00000175225 82 ntBASIC13.45□□□□□ -0.26
Chmp1aQ921W0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Gm18959-201ENSMUST00000208954 655 ntBASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms