Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Gm11452-201ENSMUST00000122376 690 ntBASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
Pcdhb1Q91Y08 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb1Q91Y08 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb1Q91Y08 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb1Q91Y08 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Pcdhb1Q91Y08 Celf4-206ENSMUST00000224553 1729 ntBASIC15.83■□□□□ 0.13
Pcdhb1Q91Y08 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb1Q91Y08 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Gm5864-201ENSMUST00000202263 970 ntBASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Gm10060-201ENSMUST00000212002 111 ntBASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb1Q91Y08 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Gm13884-201ENSMUST00000118103 829 ntBASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms