Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Gm7506-201ENSMUST00000207758 815 ntBASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb4Q91XZ6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb4Q91XZ6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Gm12895-201ENSMUST00000122214 226 ntBASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb4Q91XZ6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms