Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
Pcdhb6Q91XZ4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Gm45167-201ENSMUST00000208007 322 ntBASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb6Q91XZ4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Gm13036-201ENSMUST00000117799 748 ntBASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Gm7787-201ENSMUST00000216858 688 ntBASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb6Q91XZ4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms