Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
StrcQ8VIM6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
StrcQ8VIM6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
StrcQ8VIM6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
StrcQ8VIM6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
StrcQ8VIM6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.89■□□□□ 0.45
StrcQ8VIM6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
StrcQ8VIM6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
StrcQ8VIM6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
StrcQ8VIM6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
StrcQ8VIM6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
StrcQ8VIM6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
StrcQ8VIM6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
StrcQ8VIM6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
StrcQ8VIM6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Gm5354-201ENSMUST00000182417 973 ntBASIC17.88■□□□□ 0.45
StrcQ8VIM6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
StrcQ8VIM6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
StrcQ8VIM6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Olfr286-202ENSMUST00000205305 969 ntBASIC17.87■□□□□ 0.45
StrcQ8VIM6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
StrcQ8VIM6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
StrcQ8VIM6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
StrcQ8VIM6 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.86■□□□□ 0.45
StrcQ8VIM6 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
StrcQ8VIM6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
StrcQ8VIM6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
StrcQ8VIM6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
StrcQ8VIM6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
StrcQ8VIM6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.86■□□□□ 0.45
StrcQ8VIM6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
StrcQ8VIM6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.86■□□□□ 0.45
StrcQ8VIM6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
StrcQ8VIM6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
StrcQ8VIM6 AA619741-201ENSMUST00000195095 646 ntBASIC17.86■□□□□ 0.45
StrcQ8VIM6 Gm6916-202ENSMUST00000205523 195 ntBASIC17.86■□□□□ 0.45
StrcQ8VIM6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
StrcQ8VIM6 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.86■□□□□ 0.45
StrcQ8VIM6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
StrcQ8VIM6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
StrcQ8VIM6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
StrcQ8VIM6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
StrcQ8VIM6 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.85■□□□□ 0.45
StrcQ8VIM6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
StrcQ8VIM6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.85■□□□□ 0.45
StrcQ8VIM6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Snora78-201ENSMUST00000158630 128 ntBASIC17.85■□□□□ 0.45
StrcQ8VIM6 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.85■□□□□ 0.45
StrcQ8VIM6 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.85■□□□□ 0.45
StrcQ8VIM6 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.85■□□□□ 0.45
StrcQ8VIM6 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.85■□□□□ 0.45
StrcQ8VIM6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
StrcQ8VIM6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms