Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdhr1Q8VHP6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdhr1Q8VHP6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdhr1Q8VHP6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdhr1Q8VHP6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdhr1Q8VHP6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdhr1Q8VHP6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cdhr1Q8VHP6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Gm12008-201ENSMUST00000117791 755 ntBASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Gm11025-201ENSMUST00000140773 466 ntBASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdhr1Q8VHP6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdhr1Q8VHP6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdhr1Q8VHP6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Cdhr1Q8VHP6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms