Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Gm15483-201ENSMUST00000120338 456 ntBASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Gm15823-201ENSMUST00000064305 670 ntBASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 AY702102-202ENSMUST00000194651 1173 ntBASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Lmcd1Q8VEE1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Gm17150-201ENSMUST00000165577 381 ntBASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Gm27920-201ENSMUST00000183953 96 ntBASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lmcd1Q8VEE1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms