Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Gm8749-201ENSMUST00000117737 331 ntBASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Gm13464-201ENSMUST00000119418 935 ntBASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vopp1Q8R1C3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vopp1Q8R1C3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vopp1Q8R1C3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.02■□□□□ 0.15
Vopp1Q8R1C3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Vopp1Q8R1C3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vopp1Q8R1C3 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.02■□□□□ 0.15
Vopp1Q8R1C3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vopp1Q8R1C3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vopp1Q8R1C3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vopp1Q8R1C3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vopp1Q8R1C3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vopp1Q8R1C3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Gm27533-201ENSMUST00000183800 152 ntBASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Gm6888-201ENSMUST00000221983 706 ntBASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Vopp1Q8R1C3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16■□□□□ 0.15
Vopp1Q8R1C3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Gm12428-201ENSMUST00000119844 727 ntBASIC16■□□□□ 0.15
Vopp1Q8R1C3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Gm4691-201ENSMUST00000182339 1000 ntBASIC16■□□□□ 0.15
Vopp1Q8R1C3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Gm2451-201ENSMUST00000199447 999 ntBASIC16■□□□□ 0.15
Vopp1Q8R1C3 Gm10290-201ENSMUST00000200451 999 ntBASIC16■□□□□ 0.15
Vopp1Q8R1C3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Vopp1Q8R1C3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Gm9063-201ENSMUST00000223299 582 ntBASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vopp1Q8R1C3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms