Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a1Q8K4Z5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.64■□□□□ 0.58
Sf3a1Q8K4Z5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sf3a1Q8K4Z5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.64■□□□□ 0.58
Sf3a1Q8K4Z5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 Gm10499-201ENSMUST00000174094 934 ntBASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 Psmb5-202ENSMUST00000227257 622 ntBASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a1Q8K4Z5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a1Q8K4Z5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Gm27300-201ENSMUST00000184085 97 ntBASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Gm27335-201ENSMUST00000184758 97 ntBASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 AW822252-206ENSMUST00000208904 237 ntBASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a1Q8K4Z5 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms