Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col23a1Q8K4G2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col23a1Q8K4G2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col23a1Q8K4G2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col23a1Q8K4G2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Col23a1Q8K4G2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col23a1Q8K4G2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col23a1Q8K4G2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col23a1Q8K4G2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col23a1Q8K4G2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Gm12957-201ENSMUST00000117835 377 ntBASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Gm6222-201ENSMUST00000120787 396 ntBASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Gm9229-201ENSMUST00000222777 126 ntBASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col23a1Q8K4G2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Gm4984-201ENSMUST00000115987 360 ntBASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col23a1Q8K4G2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Gm13216-201ENSMUST00000117145 591 ntBASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Gm45841-201ENSMUST00000207700 164 ntBASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col23a1Q8K4G2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms