Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cchcr1Q8K2I2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cchcr1Q8K2I2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cchcr1Q8K2I2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cchcr1Q8K2I2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.02■□□□□ 0.47
Cchcr1Q8K2I2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cchcr1Q8K2I2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cchcr1Q8K2I2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cchcr1Q8K2I2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cchcr1Q8K2I2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.02■□□□□ 0.47
Cchcr1Q8K2I2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cchcr1Q8K2I2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cchcr1Q8K2I2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cchcr1Q8K2I2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cchcr1Q8K2I2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.01■□□□□ 0.47
Cchcr1Q8K2I2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.01■□□□□ 0.47
Cchcr1Q8K2I2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.01■□□□□ 0.47
Cchcr1Q8K2I2 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.01■□□□□ 0.47
Cchcr1Q8K2I2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cchcr1Q8K2I2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cchcr1Q8K2I2 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.01■□□□□ 0.47
Cchcr1Q8K2I2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cchcr1Q8K2I2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cchcr1Q8K2I2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cchcr1Q8K2I2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Gm8242-201ENSMUST00000193029 1420 ntBASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Gm45293-201ENSMUST00000209754 1812 ntBASIC18■□□□□ 0.47
Cchcr1Q8K2I2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cchcr1Q8K2I2 Gm7901-201ENSMUST00000120430 1597 ntBASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms