Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm13823-201ENSMUST00000119930 345 ntBASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm14719-201ENSMUST00000121891 340 ntBASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rtn4rl1Q8K0S5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm7488-201ENSMUST00000117148 684 ntBASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm14767-201ENSMUST00000121559 586 ntBASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm43438-201ENSMUST00000198133 379 ntBASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.3■□□□□ 0.04
Rtn4rl1Q8K0S5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm16215-201ENSMUST00000161990 637 ntBASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rl1Q8K0S5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms