Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Prob1-201ENSMUST00000097619 3021 ntBASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab11fip3Q8CHD8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rab11fip3Q8CHD8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
Rab11fip3Q8CHD8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rab11fip3Q8CHD8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rab11fip3Q8CHD8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rab11fip3Q8CHD8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rab11fip3Q8CHD8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rab11fip3Q8CHD8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Gm43474-201ENSMUST00000196415 774 ntBASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Gm43125-201ENSMUST00000201724 730 ntBASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Gm8096-201ENSMUST00000209921 1591 ntBASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab11fip3Q8CHD8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Gm25287-201ENSMUST00000103846 110 ntBASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Gm22918-201ENSMUST00000103855 110 ntBASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Gm11543-201ENSMUST00000120758 370 ntBASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rab11fip3Q8CHD8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Gm6973-201ENSMUST00000117080 721 ntBASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Gm43767-201ENSMUST00000198933 381 ntBASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms