Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smc4Q8CG47 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.75■□□□□ 0.59
Smc4Q8CG47 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc4Q8CG47 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.73■□□□□ 0.59
Smc4Q8CG47 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.73■□□□□ 0.59
Smc4Q8CG47 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc4Q8CG47 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Smc4Q8CG47 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.72■□□□□ 0.59
Smc4Q8CG47 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc4Q8CG47 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc4Q8CG47 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.72■□□□□ 0.59
Smc4Q8CG47 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc4Q8CG47 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.72■□□□□ 0.59
Smc4Q8CG47 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.72■□□□□ 0.59
Smc4Q8CG47 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc4Q8CG47 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc4Q8CG47 Prob1-201ENSMUST00000097619 3021 ntBASIC18.72■□□□□ 0.59
Smc4Q8CG47 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Smc4Q8CG47 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc4Q8CG47 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.71■□□□□ 0.59
Smc4Q8CG47 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.71■□□□□ 0.59
Smc4Q8CG47 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.71■□□□□ 0.59
Smc4Q8CG47 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc4Q8CG47 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Smc4Q8CG47 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Smc4Q8CG47 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms