Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nup88Q8CEC0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Nup88Q8CEC0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Gm6550-201ENSMUST00000187574 993 ntBASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup88Q8CEC0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Gm25925-201ENSMUST00000158314 306 ntBASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Gm5264-201ENSMUST00000190584 848 ntBASIC17.97■□□□□ 0.47
Nup88Q8CEC0 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.97■□□□□ 0.47
Nup88Q8CEC0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Gm15590-201ENSMUST00000078419 552 ntBASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nup88Q8CEC0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Gm15467-201ENSMUST00000120582 445 ntBASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nup88Q8CEC0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup88Q8CEC0 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup88Q8CEC0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms