Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc38Q8CDN8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc38Q8CDN8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc38Q8CDN8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc38Q8CDN8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Gm11780-201ENSMUST00000136880 516 ntBASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Gm27646-201ENSMUST00000183989 110 ntBASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.95■□□□□ 0.3
Ccdc38Q8CDN8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc38Q8CDN8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Gm6296-201ENSMUST00000222599 943 ntBASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc38Q8CDN8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Gm28033-201ENSMUST00000184224 96 ntBASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms