Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Rpph1-201ENSMUST00000175096 319 ntBASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.63■□□□□ 0.41
Shisa4Q8CA71 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Chchd1-203ENSMUST00000224633 557 ntBASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Shisa4Q8CA71 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Gm15427-201ENSMUST00000117288 531 ntBASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa4Q8CA71 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Gm2272-201ENSMUST00000194903 582 ntBASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa4Q8CA71 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms