Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Gm5364-201ENSMUST00000216789 889 ntBASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc60Q8C4J0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc60Q8C4J0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc60Q8C4J0 Gm14140-201ENSMUST00000119999 995 ntBASIC19.43■□□□□ 0.7
Ccdc60Q8C4J0 Gm18246-201ENSMUST00000221023 728 ntBASIC19.43■□□□□ 0.7
Ccdc60Q8C4J0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc60Q8C4J0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc60Q8C4J0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc60Q8C4J0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc60Q8C4J0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc60Q8C4J0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc60Q8C4J0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc60Q8C4J0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc60Q8C4J0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Gm18206-201ENSMUST00000207027 926 ntBASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Gm29340-201ENSMUST00000188763 3854 ntBASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc60Q8C4J0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc60Q8C4J0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc60Q8C4J0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Ccdc60Q8C4J0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc60Q8C4J0 Gm13597-201ENSMUST00000121239 375 ntBASIC19.4■□□□□ 0.7
Ccdc60Q8C4J0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc60Q8C4J0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc60Q8C4J0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms