Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Usp44Q8C2S0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp44Q8C2S0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp44Q8C2S0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp44Q8C2S0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp44Q8C2S0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Usp44Q8C2S0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp44Q8C2S0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Usp44Q8C2S0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Gm5364-201ENSMUST00000216789 889 ntBASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp44Q8C2S0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Gm44771-201ENSMUST00000206975 626 ntBASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms