Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.76□□□□□ -0.05
Cpne3Q8BT60 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.76□□□□□ -0.05
Cpne3Q8BT60 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Gm7506-201ENSMUST00000207758 815 ntBASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Cpne3Q8BT60 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Gm4459-201ENSMUST00000118750 468 ntBASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne3Q8BT60 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne3Q8BT60 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne3Q8BT60 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne3Q8BT60 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne3Q8BT60 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne3Q8BT60 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne3Q8BT60 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne3Q8BT60 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.73□□□□□ -0.05
Cpne3Q8BT60 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms