Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 BC037039-201ENSMUST00000192003 2205 ntBASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4Q8BQZ5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Gm4535-201ENSMUST00000182274 558 ntBASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Gm10355-201ENSMUST00000097146 517 ntBASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4Q8BQZ5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Gm11780-201ENSMUST00000136880 516 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms