Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
VmacQ8BP01 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
VmacQ8BP01 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
VmacQ8BP01 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 Gm12008-201ENSMUST00000117791 755 ntBASIC17.5■□□□□ 0.39
VmacQ8BP01 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
VmacQ8BP01 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.5■□□□□ 0.39
VmacQ8BP01 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.5■□□□□ 0.39
VmacQ8BP01 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.5■□□□□ 0.39
VmacQ8BP01 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VmacQ8BP01 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
VmacQ8BP01 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Gm13597-201ENSMUST00000121239 375 ntBASIC17.49■□□□□ 0.39
VmacQ8BP01 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.49■□□□□ 0.39
VmacQ8BP01 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.49■□□□□ 0.39
VmacQ8BP01 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.49■□□□□ 0.39
VmacQ8BP01 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.49■□□□□ 0.39
VmacQ8BP01 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.49■□□□□ 0.39
VmacQ8BP01 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
VmacQ8BP01 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.49■□□□□ 0.39
VmacQ8BP01 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
VmacQ8BP01 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VmacQ8BP01 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VmacQ8BP01 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
VmacQ8BP01 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VmacQ8BP01 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VmacQ8BP01 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VmacQ8BP01 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VmacQ8BP01 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VmacQ8BP01 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VmacQ8BP01 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.48■□□□□ 0.39
VmacQ8BP01 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VmacQ8BP01 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VmacQ8BP01 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.48■□□□□ 0.39
VmacQ8BP01 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
VmacQ8BP01 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.48■□□□□ 0.39
VmacQ8BP01 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
VmacQ8BP01 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
VmacQ8BP01 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VmacQ8BP01 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VmacQ8BP01 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
VmacQ8BP01 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.47■□□□□ 0.39
VmacQ8BP01 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.47■□□□□ 0.39
VmacQ8BP01 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
VmacQ8BP01 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VmacQ8BP01 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VmacQ8BP01 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
VmacQ8BP01 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms