Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 Ldb3-207ENSMUST00000227819 1499 ntBASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 Tcf21-202ENSMUST00000218002 1788 ntBASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC19.75■□□□□ 0.75
Col16a1Q8BLX7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Gm15653-201ENSMUST00000119247 907 ntBASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 AC125350.2-201ENSMUST00000224737 727 ntBASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Mir1897-201ENSMUST00000122581 272 ntBASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Gm18018-201ENSMUST00000198273 408 ntBASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col16a1Q8BLX7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Gm3436-201ENSMUST00000179930 840 ntBASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Gm9908-201ENSMUST00000211534 448 ntBASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Gm46209-201ENSMUST00000217912 553 ntBASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Gm20445-201ENSMUST00000061905 565 ntBASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Col16a1Q8BLX7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Gm6222-201ENSMUST00000120787 396 ntBASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Gm45098-201ENSMUST00000207179 657 ntBASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms