Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Mir5122-201ENSMUST00000175004 89 ntBASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Gm20760-201ENSMUST00000179197 648 ntBASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3bQ8BHK2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3bQ8BHK2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Gm13168-201ENSMUST00000121771 632 ntBASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms