Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smndc1Q8BGT7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smndc1Q8BGT7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smndc1Q8BGT7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smndc1Q8BGT7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Smndc1Q8BGT7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Smndc1Q8BGT7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smndc1Q8BGT7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smndc1Q8BGT7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smndc1Q8BGT7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smndc1Q8BGT7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smndc1Q8BGT7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.86□□□□□ -0.03
Smndc1Q8BGT7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smndc1Q8BGT7 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.86□□□□□ -0.03
Smndc1Q8BGT7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Actl10-202ENSMUST00000226583 1501 ntBASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.85□□□□□ -0.03
Smndc1Q8BGT7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Gm29518-201ENSMUST00000190858 372 ntBASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Gm17808-201ENSMUST00000200859 894 ntBASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smndc1Q8BGT7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smndc1Q8BGT7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smndc1Q8BGT7 Rubie-203ENSMUST00000227803 2430 ntBASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Gm6623-201ENSMUST00000173570 544 ntBASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smndc1Q8BGT7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smndc1Q8BGT7 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms