Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Mir6982-201ENSMUST00000184354 68 ntBASIC16.22■□□□□ 0.19
Trim6Q8BGE7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Gm7367-201ENSMUST00000057611 492 ntBASIC16.22■□□□□ 0.19
Trim6Q8BGE7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Efs-202ENSMUST00000227037 2540 ntBASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim6Q8BGE7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.21■□□□□ 0.18
Trim6Q8BGE7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim6Q8BGE7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Gm5587-201ENSMUST00000206270 674 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms