Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Gm18018-201ENSMUST00000198273 408 ntBASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Gm12138-201ENSMUST00000122180 951 ntBASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Gm43703-201ENSMUST00000200523 763 ntBASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Gm20445-201ENSMUST00000061905 565 ntBASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trnp1Q80ZI1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Gm15653-201ENSMUST00000119247 907 ntBASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Mir1897-201ENSMUST00000122581 272 ntBASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 AC125350.2-201ENSMUST00000224737 727 ntBASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trnp1Q80ZI1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.05■□□□□ 0.32
Trnp1Q80ZI1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Gm5479-201ENSMUST00000160578 435 ntBASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Gm42612-201ENSMUST00000197986 623 ntBASIC17.04■□□□□ 0.32
Trnp1Q80ZI1 Gm43170-201ENSMUST00000199827 612 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms