Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Asic1-205ENSMUST00000228185 1818 ntBASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ttc28Q80XJ3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Gm5566-201ENSMUST00000116118 459 ntBASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Gm4875-201ENSMUST00000118257 786 ntBASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ttc28Q80XJ3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Gm11478-201ENSMUST00000117851 599 ntBASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Gm13829-201ENSMUST00000119600 138 ntBASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ttc28Q80XJ3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ttc28Q80XJ3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ttc28Q80XJ3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ttc28Q80XJ3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ttc28Q80XJ3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ttc28Q80XJ3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ttc28Q80XJ3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.71□□□□□ -0.38
Ttc28Q80XJ3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ttc28Q80XJ3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 Gm45384-201ENSMUST00000210451 277 ntBASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc28Q80XJ3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms