Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Usp6nlQ80XC3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Gm13223-201ENSMUST00000118609 747 ntBASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Gm27618-201ENSMUST00000183671 60 ntBASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp6nlQ80XC3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Gm12428-201ENSMUST00000119844 727 ntBASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Gm18737-201ENSMUST00000173594 937 ntBASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp6nlQ80XC3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp6nlQ80XC3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Usp6nlQ80XC3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp6nlQ80XC3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.77■□□□□ 0.28
Usp6nlQ80XC3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp6nlQ80XC3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp6nlQ80XC3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp6nlQ80XC3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.77■□□□□ 0.28
Usp6nlQ80XC3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Usp6nlQ80XC3 Gm27306-201ENSMUST00000183970 107 ntBASIC16.77■□□□□ 0.28
Usp6nlQ80XC3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.77■□□□□ 0.28
Usp6nlQ80XC3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp6nlQ80XC3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.77■□□□□ 0.28
Usp6nlQ80XC3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp6nlQ80XC3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp6nlQ80XC3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp6nlQ80XC3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.77■□□□□ 0.27
Usp6nlQ80XC3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Usp6nlQ80XC3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms