Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim62Q80V85 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim62Q80V85 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim62Q80V85 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim62Q80V85 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim62Q80V85 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim62Q80V85 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Trim62Q80V85 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim62Q80V85 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim62Q80V85 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim62Q80V85 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim62Q80V85 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim62Q80V85 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim62Q80V85 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim62Q80V85 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim62Q80V85 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trim62Q80V85 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim62Q80V85 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim62Q80V85 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim62Q80V85 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim62Q80V85 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim62Q80V85 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim62Q80V85 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim62Q80V85 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.74■□□□□ 0.11
Trim62Q80V85 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.74■□□□□ 0.11
Trim62Q80V85 Gm15467-201ENSMUST00000120582 445 ntBASIC15.74■□□□□ 0.11
Trim62Q80V85 Gm12260-201ENSMUST00000122447 411 ntBASIC15.74■□□□□ 0.11
Trim62Q80V85 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Trim62Q80V85 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim62Q80V85 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim62Q80V85 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.74■□□□□ 0.11
Trim62Q80V85 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim62Q80V85 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim62Q80V85 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim62Q80V85 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim62Q80V85 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trim62Q80V85 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim62Q80V85 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim62Q80V85 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trim62Q80V85 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim62Q80V85 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim62Q80V85 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim62Q80V85 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim62Q80V85 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.73■□□□□ 0.11
Trim62Q80V85 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trim62Q80V85 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trim62Q80V85 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Gm8000-201ENSMUST00000188378 592 ntBASIC15.73■□□□□ 0.11
Trim62Q80V85 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.73■□□□□ 0.11
Trim62Q80V85 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.73■□□□□ 0.11
Trim62Q80V85 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim62Q80V85 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Trim62Q80V85 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim62Q80V85 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.72■□□□□ 0.11
Trim62Q80V85 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim62Q80V85 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.72■□□□□ 0.11
Trim62Q80V85 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim62Q80V85 Gm2272-201ENSMUST00000194903 582 ntBASIC15.72■□□□□ 0.11
Trim62Q80V85 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim62Q80V85 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms