Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Gm43767-201ENSMUST00000198933 381 ntBASIC15.21■□□□□ 0.03
Rpp38Q80UU2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp38Q80UU2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpp38Q80UU2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpp38Q80UU2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpp38Q80UU2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Rpp38Q80UU2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpp38Q80UU2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Gm18733-201ENSMUST00000173950 856 ntBASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Gm27300-201ENSMUST00000184085 97 ntBASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Gm27335-201ENSMUST00000184758 97 ntBASIC15.2■□□□□ 0.02
Rpp38Q80UU2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.2■□□□□ 0.02
Rpp38Q80UU2 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.2■□□□□ 0.02
Rpp38Q80UU2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Gm7461-201ENSMUST00000058918 827 ntBASIC15.19■□□□□ 0.02
Rpp38Q80UU2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp38Q80UU2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.18■□□□□ 0.02
Rpp38Q80UU2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms