Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Gm27389-201ENSMUST00000183622 195 ntBASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Mir5130-201ENSMUST00000175160 84 ntBASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx4Q7TNK1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx4Q7TNK1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms